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  5. Len_g10650

Len_g10650


Description : substrate adaptor of SCF E3 ubiquitin ligase *(SLY) & original description: none


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10650
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Als_g60927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24799.t1 Aspi01Gene24799 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Gb_08961 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g06600.1 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Mp5g06150.1 No alias SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Ore_g32241 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Tin_g03889 No alias substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Zm00001e014934_P001 SLY1, Zm00001e014934 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!