AT3G54510

Description : Early-responsive to dehydration stress protein (ERD4)

Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001215 (LandPlants) Phylogenetic Tree(s): OG_02_0001215_tree ,
OG_03_0010928 (SeedPlants) Phylogenetic Tree(s): OG_03_0010928_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54510
Cluster	HCCA: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01011097001	No alias	Solute transport.channels.OSCA calcium-permeable channel	0.05	Archaeplastida
Gb_08556	No alias	calcium-permeable channel (OSCA)	0.03	Archaeplastida
LOC_Os03g51620.1	No alias	calcium-permeable channel (OSCA)	0.03	Archaeplastida
LOC_Os05g51630.1	No alias	calcium-permeable channel (OSCA)	0.03	Archaeplastida
LOC_Os12g39320.1	No alias	calcium-permeable channel (OSCA)	0.02	Archaeplastida
MA_125601g0010	No alias	calcium-permeable channel (OSCA)	0.03	Archaeplastida
MA_317011g0010	No alias	CSC1-like protein HYP1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Mp7g04480.1	No alias	calcium-permeable channel (OSCA)	0.02	Archaeplastida
AT3G01100	HYP1, ATHYP1	hypothetical protein 1	0.03	LandPlants
Solyc04g077400.4.1	No alias	calcium-permeable channel (OSCA)	0.02	LandPlants
Zm00001e012117_P001	No alias	calcium-permeable channel (OSCA)	0.02	LandPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	RCA	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032880	Csc1_N	4	73
IPR027815	PHM7_cyt	94	243
IPR003864	RSN1_7TM	255	522

External Links

No external refs found!

AT3G54510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation