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  5. Len_g10560

Len_g10560


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10560

Target Alias Description ECC score Gene Family Method Actions
Als_g00944 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15044 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13749 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000044 No alias not classified & original description: CDS=74-412 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005643 ZOU, RGE1 bHLH-type transcription factor & original description: CDS=1-1506 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011220 ZOU, RGE1 bHLH-type transcription factor & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Sam_g18209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 331 383
No external refs found!