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AT3G54460


Description : SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein


Gene families : OG_01_0004869 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004869_tree ,
OG_02_0005737 (LandPlants) Phylogenetic Tree(s): OG_02_0005737_tree ,
OG_03_0007448 (SeedPlants) Phylogenetic Tree(s): OG_03_0007448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54460
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
MA_64225g0010 No alias chromatin remodeling factor (SHPRH) 0.02 Archaeplastida
AMTR_s00063p00087380 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 LandPlants
MA_64225g0010 No alias chromatin remodeling factor (SHPRH) 0.02 LandPlants
AMTR_s00063p00087380 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 SeedPlants
MA_64225g0010 No alias chromatin remodeling factor (SHPRH) 0.02 SeedPlants
Solyc11g005250.3.1 No alias chromatin remodeling factor (SHPRH) 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 287 322
IPR011124 Znf_CW 577 619
IPR001650 Helicase_C 1194 1289
IPR000330 SNF2_dom 333 969
No external refs found!