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  5. Len_g10281

Len_g10281


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10281
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037209 No alias subfamily ABCG transporter & original description: CDS=211-2310 0.04 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19285 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_18507g0010 ABCG14 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Nbi_g10128 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063400.3.1 Solyc07g063400 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g013640.2.1 Solyc12g013640 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009010_P001 ABCG25,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 175 329
IPR013525 ABC_2_trans 500 708
No external refs found!