AT3G54190

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0002229 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002229_tree ,
OG_02_0002157 (LandPlants) Phylogenetic Tree(s): OG_02_0002157_tree ,
OG_03_0002721 (SeedPlants) Phylogenetic Tree(s): OG_03_0002721_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54190
Cluster	HCCA: Cluster_217

Target	Alias	Description	ECC score	Gene Family Method
MA_158067g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp7g13820.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc06g048480.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e039627_P004	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os02g54090.1	No alias	no hits & (original description: none)	0.02	LandPlants
MA_158067g0010	No alias	no hits & (original description: none)	0.03	LandPlants
Mp7g13820.1	No alias	no hits & (original description: none)	0.02	LandPlants
Smo270172	No alias	No description available	0.02	LandPlants
Solyc06g048480.3.1	No alias	no hits & (original description: none)	0.04	LandPlants
Zm00001e039627_P004	No alias	no hits & (original description: none)	0.04	LandPlants
MA_158067g0010	No alias	no hits & (original description: none)	0.03	SeedPlants
Solyc03g095260.3.1	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc06g048480.3.1	No alias	no hits & (original description: none)	0.04	SeedPlants
Zm00001e031964_P001	No alias	no hits & (original description: none)	0.02	SeedPlants
Zm00001e039627_P004	No alias	no hits & (original description: none)	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G54190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation