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  5. Len_g10149

Len_g10149 (ATBT1, EMB42, EMB104, SHS1)


Aliases : ATBT1, EMB42, EMB104, SHS1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0002083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10149

Target Alias Description ECC score Gene Family Method Actions
Cba_g12402 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G040300.1 ATBT1, EMB42,... solute transporter *(MTCC) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11481 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02634 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23838 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g10800.1 ATBT1, EMB42,... solute transporter (MTCC) 0.01 OrthoFinder output from all 47 species
Nbi_g17604 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.14 OrthoFinder output from all 47 species
Ppi_g07483 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Smo173502 ATBT1, EMB42,... Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 220 307
IPR018108 Mitochondrial_sb/sol_carrier 130 213
IPR018108 Mitochondrial_sb/sol_carrier 315 406
No external refs found!