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  5. Len_g09909

Len_g09909 (CLPP6, NCLPP1, NCLPP6)


Aliases : CLPP6, NCLPP1, NCLPP6

Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0006579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09909

Target Alias Description ECC score Gene Family Method Actions
Adi_g031237 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ala_g37589 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
Als_g13136 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aob_g11501 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016034 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dac_g04527 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dde_g10453 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.06 OrthoFinder output from all 47 species
Ehy_g00383 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
GSVIVT01031936001 CLPP6, NCLPP1, NCLPP6 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os03g29810.1 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.03 OrthoFinder output from all 47 species
Lfl_g05845 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
Mp4g17530.1 CLPP6, NCLPP1, NCLPP6 proteolytic core component ClpP1/3-6 of chloroplast... 0.03 OrthoFinder output from all 47 species
Ore_g15241 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ore_g40969 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pir_g16719 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
Sam_g07340 No alias proteolytic core component *(ClpP1/3-6) of chloroplast... 0.05 OrthoFinder output from all 47 species
Solyc10g051310.2.1 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.04 OrthoFinder output from all 47 species
Spa_g00289 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.06 OrthoFinder output from all 47 species
Tin_g31246 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.02 OrthoFinder output from all 47 species
Zm00001e016157_P003 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 94 267
No external refs found!