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  5. Len_g09775

Len_g09775 (HY4, ATCRY1, BLU1, OOP2, CRY1)


Aliases : HY4, ATCRY1, BLU1, OOP2, CRY1

Description : cryptochrome photoreceptor *(CRY) & original description: none


Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09775
Cluster HCCA:
  • Cluster_120
    		•

    Target Alias Description ECC score Gene Family Method Actions
    Aob_g07370 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
    MA_10431129g0010 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.03 OrthoFinder output from all 47 species
    Nbi_g11627 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
    Pir_g11810 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
    Spa_g39324 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.01 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0000287 magnesium ion binding IEP HCCA
    MF GO:0003674 molecular_function IEP HCCA
    MF GO:0003723 RNA binding IEP HCCA
    MF GO:0004312 fatty acid synthase activity IEP HCCA
    MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
    CC GO:0005575 cellular_component IEP HCCA
    BP GO:0006811 monoatomic ion transport IEP HCCA
    BP GO:0006812 monoatomic cation transport IEP HCCA
    MF GO:0008237 metallopeptidase activity IEP HCCA
    MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
    MF GO:0009922 fatty acid elongase activity IEP HCCA
    MF GO:0015078 proton transmembrane transporter activity IEP HCCA
    MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
    MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
    CC GO:0016020 membrane IEP HCCA
    MF GO:0019842 vitamin binding IEP HCCA
    MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
    MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
    BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
    MF GO:0050997 quaternary ammonium group binding IEP HCCA
    BP GO:0055085 transmembrane transport IEP HCCA
    BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
    BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
    BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
    CC GO:0110165 cellular anatomical entity IEP HCCA
    MF GO:1901681 sulfur compound binding IEP HCCA
    BP GO:1902600 proton transmembrane transport IEP HCCA
    InterPro domains Description Start Stop
    IPR006050 DNA_photolyase_N 6 159
    IPR005101 Cryptochr/Photolyase_FAD-bd 287 486
    No external refs found!