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  5. Len_g09759

Len_g09759


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09759

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029967001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.04 OrthoFinder output from all 47 species
LOC_Os07g30020.1 LOC_Os07g30020 no description available(sp|q9m2r0|ftip3_arath : 1066.0) 0.02 OrthoFinder output from all 47 species
MA_10427533g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.01 OrthoFinder output from all 47 species
Nbi_g05454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_19130V3.1 Pp3c7_19130 No annotation 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019620 No alias not classified & original description: CDS=1-3645 0.02 OrthoFinder output from all 47 species
Solyc01g065500.3.1 Solyc01g065500 Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 1113 1268
IPR000008 C2_dom 699 806
IPR000008 C2_dom 541 643
IPR000008 C2_dom 6 107
IPR000008 C2_dom 860 968
No external refs found!