AT3G53400


Description : BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).


Gene families : OG_01_0002195 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002195_tree ,
OG_02_0001609 (LandPlants) Phylogenetic Tree(s): OG_02_0001609_tree ,
OG_03_0013866 (SeedPlants) Phylogenetic Tree(s): OG_03_0013866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53400
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Gb_40779 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os07g49210.1 No alias RDR2-polymerase accessory protein (CLSY1/2) 0.02 LandPlants
Gb_40779 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013216 Methyltransf_11 159 200
No external refs found!