AT3G53120 (VPS37-1)

Aliases : VPS37-1

Description : Modifier of rudimentary (Mod(r)) protein

Gene families : OG_01_0002743 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002743_tree ,
OG_02_0002584 (LandPlants) Phylogenetic Tree(s): OG_02_0002584_tree ,
OG_03_0003263 (SeedPlants) Phylogenetic Tree(s): OG_03_0003263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G53120
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020675.80	No alias	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.01	Archaeplastida
LOC_Os03g08770.1	No alias	component VPS37 of ESCRT-I complex	0.04	Archaeplastida
MA_10431428g0010	No alias	component VPS37 of ESCRT-I complex	0.04	Archaeplastida
Pp3c1_40630V3.1	No alias	Modifier of rudimentary (Mod(r)) protein	0.03	Archaeplastida
Zm00001e000639_P002	No alias	component VPS37 of ESCRT-I complex	0.03	Archaeplastida
GSVIVT01033713001	No alias	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.02	LandPlants
LOC_Os03g08770.1	No alias	component VPS37 of ESCRT-I complex	0.03	LandPlants
MA_10431428g0010	No alias	component VPS37 of ESCRT-I complex	0.04	LandPlants
Zm00001e000639_P002	No alias	component VPS37 of ESCRT-I complex	0.03	LandPlants
Zm00001e038844_P006	No alias	component VPS37 of ESCRT-I complex	0.02	LandPlants
MA_10431428g0010	No alias	component VPS37 of ESCRT-I complex	0.04	SeedPlants
Zm00001e000639_P002	No alias	component VPS37 of ESCRT-I complex	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009851	Mod_r	63	206

External Links

No external refs found!