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Aliases : ATPRP40C, PRP40C
Description : pre-mRNA-processing protein *(PRP40C) & original description: none
Gene families : OG0006310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00102340 | ATPRP40C,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06832 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05123 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04487 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01325 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G036100.1 | ATPRP40C,... | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14070 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g16444 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g19140 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010209001 | ATPRP40C, PRP40C | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g34380.1 | ATPRP40C,... | pre-mRNA-processing protein (PRP40C) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02397 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430753g0010 | ATPRP40C, PRP40C | pre-mRNA-processing protein (PRP40C) | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g09830.1 | ATPRP40C, PRP40C | pre-mRNA-processing protein (PRP40C) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35746 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11410 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10525 | No alias | pre-mRNA-processing protein *(PRP40C) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g25068 | No alias | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo439648 | ATPRP40C, PRP40C | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008700.3.1 | ATPRP40C,... | pre-mRNA-processing protein (PRP40C) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30945 | ATPRP40C, PRP40C | pre-mRNA-processing protein *(PRP40C) & original... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |