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Aliases : ATPUB17, PUB17
Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G58680 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082530 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43158.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44181.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02580 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14644 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02154 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g15895 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03925 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04978 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007275001 | PUB9, ATPUB9 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036669001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g49950.1 | LOC_Os02g49950 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426688g0010 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431467g0020 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| MA_365628g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g16068 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g20708 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42410 | ATPUB17, PUB17 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12553 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082440.4.1 | PUB15, Solyc04g082440 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g005670.1.1 | Solyc05g005670 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g056450.4.1 | PUB9, ATPUB9,... | U-box domain-containing protein 9 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08558 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12131 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018578_P001 | Zm00001e018578 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| No external refs found! |