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  5. Len_g08803

Len_g08803 (ATCUL3A, ATCUL3, CUL3A, CUL3)


Aliases : ATCUL3A, ATCUL3, CUL3A, CUL3

Description : scaffold component *(CUL3) of CUL3-BTB E3 ligase complexes & original description: none


Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08803

Target Alias Description ECC score Gene Family Method Actions
AT1G26830 ATCUL3A, ATCUL3,... cullin 3 0.02 OrthoFinder output from all 47 species
Adi_g009657 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.02 OrthoFinder output from all 47 species
Ala_g02559 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Als_g18973 ATCUL4, CUL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45395 ATCUL4, CUL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13417 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
GSVIVT01020008001 ATCUL3A, ATCUL3,... Cullin-3A OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01021502001 ATCUL4, CUL4 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Mp1g07340.1 ATCUL4, CUL4 scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Mp4g12190.1 ATCUL3A, ATCUL3,... scaffold component CUL3 of CUL3-BTB E3 ligase complexes 0.03 OrthoFinder output from all 47 species
Ore_g39890 AXR6, ATCUL1, CUL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14749 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Ppi_g05907 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Sam_g13649 No alias scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Smo172620 ATCUL4, CUL4 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc02g021470.4.1 ATCUL4, CUL4,... scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Tin_g01191 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquiTination... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001373 Cullin_N 29 632
IPR019559 Cullin_neddylation_domain 664 726
No external refs found!