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  5. Len_g08264

Len_g08264


Description : not classified & original description: none


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.03 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g12145 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cre10.g446350 No alias PsbP domain-containing protein 3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.07 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 79 219
No external refs found!