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  5. Len_g08163

Len_g08163


Description : plastidial splicing factor *(PDM3) & original description: none


Gene families : OG0008153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08163
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Ceric.01G002800.1 Ceric.01G002800 plastidial splicing factor *(PDM3) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g16308 No alias plastidial splicing factor *(PDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06106 No alias plastidial splicing factor *(PDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g58121 No alias plastidial splicing factor *(PDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019387_P001 Zm00001e019387 Pentatricopeptide repeat-containing protein At5g39980,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 598 627
IPR002885 Pentatricopeptide_repeat 251 280
IPR002885 Pentatricopeptide_repeat 533 556
IPR002885 Pentatricopeptide_repeat 637 662
IPR002885 Pentatricopeptide_repeat 563 591
IPR002885 Pentatricopeptide_repeat 354 398
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 423 470
IPR002885 Pentatricopeptide_repeat 282 330
No external refs found!