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  5. Len_g07886

Len_g07886 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07886

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00199510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.03 OrthoFinder output from all 47 species
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g004397 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006630 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04744 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20871 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20782 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G013400.1 Ceric.35G013400 LIM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
MA_104604g0010 WLIM1 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 112 166
IPR001781 Znf_LIM 10 64
No external refs found!