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  5. Len_g07860

Len_g07860 (OE23, OEE2, PSBP-1, PSII-P)


Aliases : OE23, OEE2, PSBP-1, PSII-P

Description : component *(PsbP) of PS-II oxygen-evolving center & original description: none


Gene families : OG0002494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07860
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00081670 OE23, OEE2,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.16 OrthoFinder output from all 47 species
AT1G06680 OE23, OEE2,... photosystem II subunit P-1 0.13 OrthoFinder output from all 47 species
Adi_g011189 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Aev_g01924 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Aev_g30044 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.08 OrthoFinder output from all 47 species
Ala_g00990 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Als_g03553 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Als_g21650 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Aob_g01026 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Aob_g05656 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Aob_g19191 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Aop_g05963 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Aop_g12139 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Azfi_s0003.g007592 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Cba_g10489 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Cba_g25186 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Ceric.04G078400.1 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.16 OrthoFinder output from all 47 species
Ceric.27G052700.1 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.16 OrthoFinder output from all 47 species
Cre12.g550850 OE23, OEE2,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.16 OrthoFinder output from all 47 species
Dac_g15493 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Dac_g15728 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.14 OrthoFinder output from all 47 species
Dcu_g13533 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Dcu_g21640 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.16 OrthoFinder output from all 47 species
Dcu_g40986 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.14 OrthoFinder output from all 47 species
Dde_g01313 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Dde_g04231 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ehy_g21933 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.12 OrthoFinder output from all 47 species
GSVIVT01020818001 OE23, OEE2,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.12 OrthoFinder output from all 47 species
LOC_Os07g04840.1 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.11 OrthoFinder output from all 47 species
Len_g40751 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.08 OrthoFinder output from all 47 species
Lfl_g00609 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Lfl_g07720 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
MA_3005g0010 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.12 OrthoFinder output from all 47 species
Mp2g17390.1 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.16 OrthoFinder output from all 47 species
Mp5g20290.1 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.14 OrthoFinder output from all 47 species
Msp_g04644 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Msp_g12392 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.12 OrthoFinder output from all 47 species
Nbi_g02033 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.11 OrthoFinder output from all 47 species
Nbi_g05171 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Ore_g07496 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g15344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05247 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.1 OrthoFinder output from all 47 species
Pnu_g09151 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Ppi_g47275 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ppi_g57764 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017634 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Sam_g12235 No alias component *(PsbP) of PS-II oxygen-evolving center &... 0.09 OrthoFinder output from all 47 species
Smo134339 OE23, OEE2,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Solyc07g044860.3.1 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.1 OrthoFinder output from all 47 species
Spa_g03007 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Spa_g03008 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Spa_g13148 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Tin_g11259 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.13 OrthoFinder output from all 47 species
Tin_g21546 OE23, OEE2,... component *(PsbP) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Zm00001e011526_P001 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.11 OrthoFinder output from all 47 species
Zm00001e032786_P002 OE23, OEE2,... component PsbP of PS-II oxygen-evolving center 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 106 274
No external refs found!