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  5. Len_g07615

Len_g07615


Description : not classified & original description: none


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07615

Target Alias Description ECC score Gene Family Method Actions
AT2G03130 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 OrthoFinder output from all 47 species
Ceric.19G029000.1 Ceric.19G029000 not classified & original description: pacid=50576272... 0.03 OrthoFinder output from all 47 species
Nbi_g03436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 77 121
IPR013823 Ribosomal_L7/L12_C 137 202
No external refs found!