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  5. Len_g07428

Len_g07428


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07428

Target Alias Description ECC score Gene Family Method Actions
Ala_g04129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g16372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g008910.3.1 Solyc04g008910 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g39969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 122 513
No external refs found!