Smo104978 (PACid_15415926)


Aliases : PACid_15415926

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo104978
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01017571001 No alias No description available 0.11 Gene family
GSVIVT01028315001 No alias No description available 0.05 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.01 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.01 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.03 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10274g0010 No alias No description available 0.01 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
MA_27642g0010 No alias No description available 0.03 Gene family
MA_33689g0010 No alias No description available 0.03 Gene family
MA_40048g0010 No alias No description available 0.01 Gene family
MA_7960347g0010 No alias No description available 0.01 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.01 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.01 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d020043 GRMZM2G363052 No description available 0.05 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d030862 GRMZM2G039112 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.01 Gene family
Zm00001d031501 GRMZM2G033656 No description available 0.01 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 68
No external refs found!