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  5. Len_g05506

Len_g05506


Description : iron-sulfur-cluster assembly transfer factor *(NEET) & original description: none


Gene families : OG0006249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05506
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00194900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g21495 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.39 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g39568 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.06 OrthoFinder output from all 47 species
GSVIVT01018482001 No alias CDGSH iron-sulfur domain-containing protein NEET... 0.01 OrthoFinder output from all 47 species
LOC_Os07g28400.1 LOC_Os07g28400 CDGSH iron-sulfur domain-containing protein NEET... 0.03 OrthoFinder output from all 47 species
Ore_g04374 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.04 OrthoFinder output from all 47 species
Pir_g56290 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.06 OrthoFinder output from all 47 species
Ppi_g35295 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.02 OrthoFinder output from all 47 species
Sam_g48455 No alias iron-sulfur-cluster assembly transfer factor *(NEET) &... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0043231 intracellular membrane-bounded organelle IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018967 FeS-contain_CDGSH-typ 63 90
No external refs found!