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  5. Len_g05502

Len_g05502


Description : not classified & original description: none


Gene families : OG0003230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05502

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00250270 evm_27.TU.AmTr_v1... Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT5G55710 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Adi_g085678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre04.g225050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Dde_g35043 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01014683001 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
MA_879423g0010 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g03360.1 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g01746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017405 No alias not classified & original description: CDS=1-657 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 89 231
No external refs found!