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  5. Len_g05338

Len_g05338 (HCT)


Aliases : HCT

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0000246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05338

Target Alias Description ECC score Gene Family Method Actions
Aop_g06939 HCT EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z041500.1 HCT, Ceric.1Z041500 EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z269900.1 HCT, Ceric.1Z269900 EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01023631001 HCT Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
LOC_Os08g10420.1 HCT, LOC_Os08g10420 Hydroxycinnamoyltransferase 4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g23553 HCT EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29255 HCT EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004618 HCT EC_2.3 acyltransferase & original description: CDS=1-1554 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025685 HCT EC_2.3 acyltransferase & original description: CDS=29-1387 0.03 OrthoFinder output from all 47 species
Solyc11g066640.1.1 Solyc11g066640 Agmatine coumaroyltransferase-2 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Spa_g05452 HCT EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!