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  5. Len_g05337

Len_g05337 (HPT1, ATHPT, TPT1, VTE2)


Aliases : HPT1, ATHPT, TPT1, VTE2

Description : homogentisate phytyltransferase *(HPT) & original description: none


Gene families : OG0002068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05337
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Ala_g06038 HPT1, ATHPT, TPT1, VTE2 homogentisate phytyltransferase *(HPT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g00665 HPT1, ATHPT, TPT1, VTE2 homogentisate phytyltransferase *(HPT) & original... 0.09 OrthoFinder output from all 47 species
Ceric.31G010200.1 HPT1, ATHPT,... homogentisate phytyltransferase *(HPT) & original... 0.03 OrthoFinder output from all 47 species
Dac_g11690 HPT1, ATHPT, TPT1, VTE2 homogentisate phytyltransferase *(HPT) & original... 0.04 OrthoFinder output from all 47 species
Msp_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37743 HPT1, ATHPT, TPT1, VTE2 homogentisate phytyltransferase *(HPT) & original... 0.04 OrthoFinder output from all 47 species
Spa_g51607 HPT1, ATHPT, TPT1, VTE2 homogentisate phytyltransferase *(HPT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000537 UbiA_prenyltransferase 134 395
No external refs found!