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  5. Len_g05232

Len_g05232 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05232

Target Alias Description ECC score Gene Family Method Actions
Dde_g24170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015970001 ATCNGC8, CNGC8 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Lfl_g17251 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_577986g0010 ATCNGC20, CNGC20, CNBT1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g06447 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Sam_g50440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo416791 DND1, ATCNGC2, CNGC2 External stimuli response.temperature.temperature... 0.02 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e032059_P001 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 23 268
No external refs found!