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  5. Len_g05152

Len_g05152 (ATVAMP721, VAMP7B,...)


Aliases : ATVAMP721, VAMP7B, VAMP721, AT VAMP7B

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05152

Target Alias Description ECC score Gene Family Method Actions
AT2G33120 SAR1, ATVAMP722, VAMP722 synaptobrevin-related protein 1 0.02 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Dac_g20145 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
LOC_Os03g06960.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
LOC_Os07g14540.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
Lfl_g22017 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
MA_174857g0010 VAMP726, ATVAMP726 R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Mp4g07690.1 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species
Pnu_g01930 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Solyc12g098180.3.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
Spa_g17472 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Spa_g38131 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 129 215
IPR010908 Longin_dom 32 110
No external refs found!