Len_g04728

Description : not classified & original description: none

Gene families : OG0001761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g04728

Target	Alias	Description	ECC score	Gene Family Method
Aob_g01420	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.14G057100.1	Ceric.14G057100	not classified & original description: pacid=50633933...	0.02	OrthoFinder output from all 47 species
Dac_g02174	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g03707	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g06937	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003192	No alias	not classified & original description: CDS=1-1224	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017547	No alias	not classified & original description: CDS=3-1067	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	64	177
IPR004095	TGS	290	366
IPR031662	GTP-binding_2	184	289

External Links

No external refs found!