Len_g04697


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04697

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005790 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046905 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053631 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095424 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34629 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g34115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33246 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46291 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36681 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22334.t1 Aspi01Gene22334 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41775.t2 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45256.t1 EMB2758, Aspi01Gene45256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47602.t1 Aspi01Gene47602 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51655.t1 Aspi01Gene51655 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065265 No alias not classified & original description: CDS=1-2829 0.04 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11842 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28137 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17104 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43186 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06075 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Len_g04103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g06837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13610 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12890 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g29840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30507 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30384 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 224
IPR002885 Pentatricopeptide_repeat 2 17
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 225 272
No external refs found!