Len_g04633


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04633

Target Alias Description ECC score Gene Family Method Actions
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g33998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.06 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.05 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35112 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75345 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.05 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.06 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.04 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.06 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23588 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02887 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18835 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48712 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39284 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05869 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015555 No alias not classified & original description: CDS=1-2496 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.04 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26883 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 199 221
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 124 170
No external refs found!