AT3G48780 (SPT1, ATSPT1)


Aliases : SPT1, ATSPT1

Description : serine palmitoyltransferase 1


Gene families : OG_01_0002692 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002692_tree ,
OG_02_0002784 (LandPlants) Phylogenetic Tree(s): OG_02_0002784_tree ,
OG_03_0002554 (SeedPlants) Phylogenetic Tree(s): OG_03_0002554_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48780
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008621001 No alias Lipid metabolism.sphingolipid metabolism.serine... 0.02 Archaeplastida
GSVIVT01008621001 No alias Lipid metabolism.sphingolipid metabolism.serine... 0.02 LandPlants
Solyc06g072320.4.1 No alias catalytic subunit 2 of serine C-palmitoyltransferase complex 0.02 LandPlants
GSVIVT01008621001 No alias Lipid metabolism.sphingolipid metabolism.serine... 0.02 SeedPlants
Gb_24136 No alias catalytic subunit 2 of serine C-palmitoyltransferase complex 0.02 SeedPlants
Solyc06g072320.4.1 No alias catalytic subunit 2 of serine C-palmitoyltransferase complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004758 serine C-palmitoyltransferase activity IGI Interproscan
MF GO:0004758 serine C-palmitoyltransferase activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0009640 photomorphogenesis IMP Interproscan
BP GO:0030148 sphingolipid biosynthetic process IMP Interproscan
BP GO:0030148 sphingolipid biosynthetic process ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 102 460
No external refs found!