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  5. Len_g04532

Len_g04532 (RCE1)


Aliases : RCE1

Description : E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original description: none


Gene families : OG0002378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04532

Target Alias Description ECC score Gene Family Method Actions
Adi_g009772 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g34741 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031919001 RCE1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Pir_g47784 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.04 OrthoFinder output from all 47 species
Solyc04g079970.3.1 RCE1, Solyc04g079970 RUB conjugation E2 protein (RCE1) 0.05 OrthoFinder output from all 47 species
Solyc06g007497.1.1 RCE1, Solyc06g007497 RUB conjugation E2 protein (RCE1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 33 168
No external refs found!