Len_g04468


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04468
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
AMTR_s00027p00248560 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.03 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G40030 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G10980 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.09 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11605 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g22999 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20236 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01957.t1 Aspi01Gene01957 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G075200.1 Ceric.06G075200 histone *(H3) & original description: pacid=50619967... 0.03 OrthoFinder output from all 47 species
Ceric.10G013500.1 Ceric.10G013500 histone *(H3) & original description: pacid=50612923... 0.03 OrthoFinder output from all 47 species
Ceric.10G015500.1 Ceric.10G015500 histone *(H3) & original description: pacid=50612308... 0.03 OrthoFinder output from all 47 species
Ceric.12G022300.1 Ceric.12G022300 histone *(H3) & original description: pacid=50601599... 0.03 OrthoFinder output from all 47 species
Ceric.14G025000.1 Ceric.14G025000 histone *(H3) & original description: pacid=50634383... 0.03 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.03 OrthoFinder output from all 47 species
Ceric.19G072300.1 Ceric.19G072300 histone *(H3) & original description: pacid=50576158... 0.03 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.03 OrthoFinder output from all 47 species
Ceric.22G049100.1 Ceric.22G049100 histone H3 variant *(CENH3) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.27G024400.1 Ceric.27G024400 histone *(H3) & original description: pacid=50605092... 0.03 OrthoFinder output from all 47 species
Ceric.27G025100.1 Ceric.27G025100 histone *(H3) & original description: pacid=50605832... 0.03 OrthoFinder output from all 47 species
Ceric.27G025200.1 Ceric.27G025200 histone *(H3) & original description: pacid=50606238... 0.03 OrthoFinder output from all 47 species
Ceric.27G026100.1 Ceric.27G026100 histone *(H3) & original description: pacid=50605944... 0.03 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.04 OrthoFinder output from all 47 species
Ceric.27G029300.1 Ceric.27G029300 histone *(H3) & original description: pacid=50605405... 0.03 OrthoFinder output from all 47 species
Ceric.27G029400.1 Ceric.27G029400 histone *(H3) & original description: pacid=50605419... 0.03 OrthoFinder output from all 47 species
Ceric.30G057000.1 Ceric.30G057000 histone *(H3) & original description: pacid=50609365... 0.03 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.02 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre16.g649900 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04344 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01832 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31882 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.07 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_36661 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os03g27310.2 LOC_Os03g27310 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.07 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.05 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_561217g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.08 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.02 OrthoFinder output from all 47 species
Mp3g07730.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.06 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Msp_g17199 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c22_8680V3.1 Pp3c22_8680 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g60005 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.02 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo176603 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.05 OrthoFinder output from all 47 species
Spa_g18210 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g46951 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g04242 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09717 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25835 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43939 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45756 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.07 OrthoFinder output from all 47 species
Zm00001e014760_P001 Zm00001e014760 histone (H3) 0.04 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.07 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.05 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e036599_P001 Zm00001e036599 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!