AT3G48590 (HAP5A, NF-YC1, ATHAP5A)


Aliases : HAP5A, NF-YC1, ATHAP5A

Description : nuclear factor Y, subunit C1


Gene families : OG_01_0000443 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000443_tree ,
OG_02_0000515 (LandPlants) Phylogenetic Tree(s): OG_02_0000515_tree ,
OG_03_0000553 (SeedPlants) Phylogenetic Tree(s): OG_03_0000553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48590
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008570001 No alias Nuclear transcription factor Y subunit C-1... 0.04 Archaeplastida
LOC_Os03g14669.2 No alias component NF-YC of NF-Y transcription factor complex 0.03 Archaeplastida
MA_161407g0010 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
Mp1g04550.1 No alias component NF-YC of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e001054_P002 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
GSVIVT01008570001 No alias Nuclear transcription factor Y subunit C-1... 0.04 LandPlants
Mp1g04550.1 No alias component NF-YC of NF-Y transcription factor complex 0.04 LandPlants
GSVIVT01008570001 No alias Nuclear transcription factor Y subunit C-1... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus IC Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
CC GO:0016602 CCAAT-binding factor complex ISS Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 65 128
No external refs found!