Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g005343 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g033736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g067925 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g077235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g097231 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g101334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g113573 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06813 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g09699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g10028 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g12178 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16565 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16587 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g19009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g26696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g30557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g36200 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g05088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g06199 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g06797 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07405 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07500 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g08105 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g15782 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g18790 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g19046 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g26222 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g27948 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g39900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g55091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g22823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g02240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g20195 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene04772.t1 | CRR22, Aspi01Gene04772 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene31781.t1 | Aspi01Gene31781 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0004.g008648 | No alias | not classified & original description: CDS=1-2118 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0037.g026000 | No alias | not classified & original description: CDS=1-2334 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0082.g038704 | No alias | not classified & original description: CDS=1-2661 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0109.g045373 | No alias | not classified & original description: CDS=1-2985 | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0280.g062299 | OSB3 | ssDNA-binding protein *(OSB) & original description: CDS=94-1002 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0312.g064188 | No alias | not classified & original description: CDS=1-2817 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s3130.g114639 | No alias | not classified & original description: CDS=34-2442 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g05286 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g05763 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.04G040300.1 | CRR22, Ceric.04G040300 | not classified & original description: pacid=50630674... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G029500.1 | Ceric.10G029500 | not classified & original description: pacid=50611787... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G051400.1 | VAC1, ECB2,... | not classified & original description: pacid=50603510... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G026700.1 | Ceric.24G026700 | not classified & original description: pacid=50628649... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G059600.1 | OTP84, Ceric.28G059600 | not classified & original description: pacid=50569965... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G018800.1 | Ceric.35G018800 | not classified & original description: pacid=50580757... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G017300.1 | Ceric.36G017300 | not classified & original description: pacid=50568624... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.39G009800.1 | CRR22, Ceric.39G009800 | not classified & original description: pacid=50582900... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g19046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g32259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g43298 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g04314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04874 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g06677 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g15722 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g20970 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g16109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024606001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
Len_g09279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g17367 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g19007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g26318 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g33321 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10338179g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
MA_20782g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
MA_237076g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
MA_8678g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
MA_9415113g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g16921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g28798 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g34466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g34533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g11260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g25097 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g33905 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12243 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g13456 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g13563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g46816 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g48319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g57991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g63637 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03245 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g07486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g45723 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g52857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g61249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0017.g007342 | No alias | not classified & original description: CDS=1-912 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0036.g011560 | No alias | not classified & original description: CDS=661-2424 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0037.g011780 | No alias | not classified & original description: CDS=1-2490 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0055.g014492 | No alias | not classified & original description: CDS=1-2247 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0139.g022629 | No alias | not classified & original description: CDS=614-2965 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14712 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19790 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo93321 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g013200.1.1 | OTP85, Solyc05g013200 | RNA editing factor (OTP85) | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g065250.1.1 | EMB2744, Solyc11g065250 | Pentatricopeptide repeat-containing protein At5g39680... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g14170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g14333 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g23704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g30211 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g42473 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g49732 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g17467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g23272 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g27046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 225 | 272 |
IPR002885 | Pentatricopeptide_repeat | 124 | 170 |
IPR002885 | Pentatricopeptide_repeat | 327 | 374 |
IPR002885 | Pentatricopeptide_repeat | 24 | 68 |
IPR002885 | Pentatricopeptide_repeat | 430 | 477 |
IPR046848 | E_motif | 549 | 606 |
IPR002885 | Pentatricopeptide_repeat | 504 | 532 |
IPR002885 | Pentatricopeptide_repeat | 404 | 426 |
No external refs found! |