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  5. Len_g04328

Len_g04328


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04328
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G48060 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 OrthoFinder output from all 47 species
Ala_g32706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05411 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g49124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01059.t1 Aspi01Gene01059 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000463 No alias not classified & original description: CDS=1-3471 0.06 OrthoFinder output from all 47 species
Cba_g04832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G003400.1 Ceric.02G003400 not classified & original description: pacid=50584556... 0.09 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.07 OrthoFinder output from all 47 species
Dcu_g04914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g30750.5 LOC_Os05g30750 no description available(sp|q60ew9|ftip7_orysj : 1527.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g35480.1 LOC_Os05g35480 no description available(sp|q9m2r0|ftip3_arath : 998.0) 0.02 OrthoFinder output from all 47 species
Lfl_g17609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g48914 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019620 No alias not classified & original description: CDS=1-3645 0.03 OrthoFinder output from all 47 species
Solyc01g086700.4.1 Solyc01g086700 no description available(sp|q60ew9|ftip7_orysj : 1084.0) 0.02 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g064230.3.1 Solyc09g064230 no description available(sp|q9m2r0|ftip3_arath : 978.0) 0.03 OrthoFinder output from all 47 species
Solyc10g078680.3.1 Solyc10g078680 no description available(sp|q9m2r0|ftip3_arath : 1358.0) 0.03 OrthoFinder output from all 47 species
Spa_g02263 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g03078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37733 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027805_P001 QKY, Zm00001e027805 Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e030514_P001 Zm00001e030514 no description available(sp|q60ew9|ftip7_orysj : 1482.0) 0.03 OrthoFinder output from all 47 species
Zm00001e037594_P001 Zm00001e037594 no description available(sp|q60ew9|ftip7_orysj : 1495.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 209 323
IPR000008 C2_dom 33 140
IPR013583 PRibTrfase_C 468 623
No external refs found!