Len_g04274 (ATBT1, EMB42, EMB104, SHS1)


Aliases : ATBT1, EMB42, EMB104, SHS1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0002083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002083_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04274
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Aop_g08586 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03903 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g25870.1 ATBT1, EMB42,... solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 147 228
IPR018108 Mitochondrial_sb/sol_carrier 330 421
IPR018108 Mitochondrial_sb/sol_carrier 238 323
No external refs found!