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  5. Len_g03946

Len_g03946


Description : histone *(H4) & original description: none


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03946

Target Alias Description ECC score Gene Family Method Actions
AT1G07820 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G28740 HIS4 histone H4 0.02 OrthoFinder output from all 47 species
AT3G45930 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46320 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G53730 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G59970 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g006378 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g013645 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g128464 No alias histone *(H4) & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene32146.t1 Aspi01Gene32146 histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007998 No alias histone *(H4) & original description: CDS=1-342 0.03 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.01 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.01 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.01 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.01 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.01 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.02 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.01 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Dac_g11115 No alias histone *(H4) & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01016576001 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01016577001 No alias Chromatin organisation.histones.H4-type histone 0.13 OrthoFinder output from all 47 species
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.05 OrthoFinder output from all 47 species
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.09 OrthoFinder output from all 47 species
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Gb_10373 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_25031 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61920.1 LOC_Os01g61920 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.04 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.04 OrthoFinder output from all 47 species
MA_10428142g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_10433778g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_116904g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_12995g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_2559098g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_74102g0010 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp4g03090.1 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
Ppi_g59171 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38432 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.04 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.06 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03600 No alias histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g42771 No alias histone *(H4) & original description: none 0.15 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e023245_P001 Zm00001e023245 histone (H4) 0.05 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e034230_P001 Zm00001e034230 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e034964_P001 Zm00001e034964 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e041377_P001 Zm00001e041377 histone (H4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 39 96
No external refs found!