Len_g03900


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00276p00017800 OTP81,... Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Adi_g008596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02288 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g05551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19144 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24107 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26442 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18332 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001067 EMB2758 not classified & original description: CDS=1-1968 0.07 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67814 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.05 OrthoFinder output from all 47 species
Ceric.03G029700.1 Ceric.03G029700 not classified & original description: pacid=50572783... 0.05 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.06 OrthoFinder output from all 47 species
Ceric.05G054800.1 Ceric.05G054800 not classified & original description: pacid=50577632... 0.04 OrthoFinder output from all 47 species
Ceric.05G085300.1 Ceric.05G085300 not classified & original description: pacid=50578726... 0.04 OrthoFinder output from all 47 species
Ceric.06G033000.1 Ceric.06G033000 not classified & original description: pacid=50620249... 0.04 OrthoFinder output from all 47 species
Ceric.07G009100.1 Ceric.07G009100 not classified & original description: pacid=50626585... 0.04 OrthoFinder output from all 47 species
Ceric.07G041800.1 Ceric.07G041800 not classified & original description: pacid=50626255... 0.04 OrthoFinder output from all 47 species
Ceric.09G066700.1 Ceric.09G066700 not classified & original description: pacid=50588343... 0.04 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.04 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.06 OrthoFinder output from all 47 species
Ceric.31G032600.1 CRR22, Ceric.31G032600 not classified & original description: pacid=50574071... 0.05 OrthoFinder output from all 47 species
Ceric.32G042700.1 Ceric.32G042700 not classified & original description: pacid=50598057... 0.06 OrthoFinder output from all 47 species
Ceric.34G030900.1 Ceric.34G030900 not classified & original description: pacid=50623489... 0.05 OrthoFinder output from all 47 species
Ceric.36G058800.1 Ceric.36G058800 not classified & original description: pacid=50569192... 0.05 OrthoFinder output from all 47 species
Ceric.39G035400.1 Ceric.39G035400 not classified & original description: pacid=50583580... 0.04 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g42618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033654001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Gb_32017 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8678g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_9415113g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g17026 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37643 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15560 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g19558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13332 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63804 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25989 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32545 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g56152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07560 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21792 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27970 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 629 675
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 324 372
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 427 473
IPR002885 Pentatricopeptide_repeat 602 624
IPR002885 Pentatricopeptide_repeat 705 727
IPR002885 Pentatricopeptide_repeat 531 560
IPR002885 Pentatricopeptide_repeat 98 123
No external refs found!