Len_g03697

Description : mTERF-type transcription factor & original description: none

Gene families : OG0004879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g03697
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AT4G38160	pde191	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Ala_g01267	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g10495	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g12153	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g02796	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene62089.t1	Aspi01Gene62089	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0488.g073506	No alias	mTERF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g15007	No alias	mTERF-type transcription factor & original description: none	0.12	OrthoFinder output from all 47 species
Dde_g07526	No alias	mTERF-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
GSVIVT01023845001	pde191	RNA biosynthesis.organelle...	0.08	OrthoFinder output from all 47 species
Gb_34004	pde191	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
MA_453913g0010	pde191	transcription factor (mTERF)	0.06	OrthoFinder output from all 47 species
Msp_g45891	No alias	mTERF-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g00835	No alias	mTERF-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Pir_g09424	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010841	No alias	mTERF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024452	No alias	mTERF-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Sam_g36082	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo83040	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Solyc11g044360.3.1	pde191, Solyc11g044360	transcription factor (mTERF)	0.06	OrthoFinder output from all 47 species
Spa_g15211	No alias	mTERF-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g42134	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g51312	No alias	mTERF-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g07914	pde191	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	116	324
IPR003690	MTERF	16	126

External Links

No external refs found!

Len_g03697

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation