AT3G48010 (ATCNGC16, CNGC16)


Aliases : ATCNGC16, CNGC16

Description : cyclic nucleotide-gated channel 16


Gene families : OG_01_0000137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000137_tree ,
OG_02_0000296 (LandPlants) Phylogenetic Tree(s): OG_02_0000296_tree ,
OG_03_0001368 (SeedPlants) Phylogenetic Tree(s): OG_03_0001368_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G48010
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000851.5 No alias Putative cyclic nucleotide-gated ion channel 8... 0.02 Archaeplastida
GSVIVT01007785001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 Archaeplastida
LOC_Os01g57370.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
LOC_Os12g06570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.11 Archaeplastida
LOC_Os12g28260.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.08 Archaeplastida
MA_11172g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
MA_602116g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g04110.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Pp3c15_680V3.1 No alias cyclic nucleotide gated channel 9 0.02 Archaeplastida
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.03 Archaeplastida
Pp3c3_20390V3.1 No alias cyclic nucleotide-binding transporter 1 0.03 Archaeplastida
Solyc02g086990.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.08 Archaeplastida
Solyc03g007260.3.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.01 Archaeplastida
Solyc03g098210.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
Zm00001e006772_P003 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Zm00001e011591_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Zm00001e017971_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 Archaeplastida
Zm00001e030701_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
GSVIVT01007785001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 LandPlants
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.04 LandPlants
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
LOC_Os12g06570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.1 LandPlants
LOC_Os12g28260.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 LandPlants
MA_11172g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 LandPlants
Pp3c15_680V3.1 No alias cyclic nucleotide gated channel 9 0.02 LandPlants
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.02 LandPlants
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 LandPlants
Zm00001e011591_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 LandPlants
Zm00001e017971_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.06 LandPlants
GSVIVT01007785001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 SeedPlants
LOC_Os02g54760.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 SeedPlants
LOC_Os12g06570.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.08 SeedPlants
Solyc02g086990.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 SeedPlants
Zm00001e011591_P002 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity ISS Interproscan
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0030551 cyclic nucleotide binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 480 568
IPR005821 Ion_trans_dom 55 384
No external refs found!