Len_g03409 (PDR11, ATPDR11)

Aliases : PDR11, ATPDR11

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g03409

Target	Alias	Description	ECC score	Gene Family Method
Als_g29224	ATPDR7, PDR7	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cre09.g395750	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
LOC_Os12g32820.1	ATPDR5, PDR5,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Lfl_g05743	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g15527	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo99541	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	11	193
IPR043926	ABCG_dom	226	278
IPR013525	ABC_2_trans	348	559
IPR013525	ABC_2_trans	1047	1259
IPR013581	PDR_assoc	565	629
IPR003439	ABC_transporter-like_ATP-bd	749	901

External Links

No external refs found!