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  5. Len_g03403

Len_g03403 (ACA8, AT-ACA8)


Aliases : ACA8, AT-ACA8

Description : P2B-type calcium cation-transporting ATPase *(ACA) & original description: none


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03403

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene43310.t1 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66958.t1 PEA1, ACA1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.68 ACA4 Calcium-transporting ATPase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.71 ACA2 Calcium-transporting ATPase 5, plasma membrane-type... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.73 PEA1, ACA1 Calcium-transporting ATPase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000836.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g681750 ACA11 Solute transport.primary active transport.P-type ATPase... 0.02 OrthoFinder output from all 47 species
Dac_g23347 ACA8, AT-ACA8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g51618 ACA9, ATACA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22999 ACA9, ATACA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23026 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34199 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44618 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016429 ATACA10, CIF1, ACA10 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.04 OrthoFinder output from all 47 species
Spa_g19937 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003611_P001 ACA8, AT-ACA8,... P2B-type calcium cation-transporting ATPase (ACA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024750 Ca_ATPase_N_dom 100 140
IPR004014 ATPase_P-typ_cation-transptr_N 195 262
IPR006068 ATPase_P-typ_cation-transptr_C 924 1098
No external refs found!