1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g03230

Len_g03230


Description : E3 ubiquitin ligase *(CHY) & original description: none


Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03230
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Aob_g05747 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.03 OrthoFinder output from all 47 species
Cre17.g718300 No alias E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g57115 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g12840.1 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR039512 RCHY1_zinc-ribbon 229 287
IPR001841 Znf_RING 181 224
IPR008913 Znf_CHY 47 127
No external refs found!