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  5. Len_g03169

Len_g03169


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03169

Target Alias Description ECC score Gene Family Method Actions
AT1G68630 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT5G51400 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
Adi_g005503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19410 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0034.g025420 No alias not classified & original description: CDS=73-783 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065264 No alias not classified & original description: CDS=216-797 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.34 PCR2 No description available 0.01 OrthoFinder output from all 47 species
Cre03.g155527 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g738000 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g24147 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_30792 No alias Cell number regulator 6 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
MA_483455g0010 PCR11 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Ore_g00226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c13_15180V3.1 Pp3c13_15180 PLAC8 family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007631 No alias not classified & original description: CDS=143-850 0.03 OrthoFinder output from all 47 species
Smo125873 No alias Cell number regulator 6 OS=Zea mays 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 64 190
No external refs found!