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  5. Len_g03111

Len_g03111


Description : not classified & original description: none


Gene families : OG0000714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03111

Target Alias Description ECC score Gene Family Method Actions
Adi_g075698 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Adi_g106792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14670 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 OrthoFinder output from all 47 species
Cba_g26644 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os09g37006.1 LOC_Os09g37006 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014411 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g33781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021556_P005 Zm00001e021556 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!