AT3G47160


Description : RING/U-box superfamily protein


Gene families : OG_01_0001188 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001188_tree ,
OG_02_0001068 (LandPlants) Phylogenetic Tree(s): OG_02_0001068_tree ,
OG_03_0000881 (SeedPlants) Phylogenetic Tree(s): OG_03_0000881_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47160
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os04g58320.2 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
LOC_Os10g30850.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Pp3c3_21640V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.06 Archaeplastida
Zm00001e010920_P002 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.03 LandPlants
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.04 LandPlants
Zm00001e010920_P002 No alias RING-HC-class E3 ligase 0.02 LandPlants
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 SeedPlants
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants
MA_121710g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.03 SeedPlants
Zm00001e010920_P002 No alias RING-HC-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!