AT3G46870

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G46870
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
Gb_00230	No alias	Pentatricopeptide repeat-containing protein At3g06430,...	0.01	Archaeplastida
Solyc01g057200.4.1	No alias	Pentatricopeptide repeat-containing protein At3g06430,...	0.02	Archaeplastida
Solyc04g054270.4.1	No alias	Pentatricopeptide repeat-containing protein PPR5...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
MF	GO:0008270	zinc ion binding	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	141	189

External Links

No external refs found!