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Aliases : RAT5, HTA1, ATHTA1
Description : histone *(H2A) & original description: none
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g02525 | |
| Cluster | HCCA: Cluster_152 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00215390 | HTA6,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00158560 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00115p00128810 | RAT5, HTA1,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| AT1G08880 | GAMMA-H2AX,... | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G51060 | HTA10 | histone H2A 10 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G54690 | GAMMA-H2AX,... | gamma histone variant H2AX | 0.02 | OrthoFinder output from all 47 species | |
| AT3G20670 | HTA13 | histone H2A 13 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G27230 | HTA2 | histone H2A 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G59870 | HTA6 | histone H2A 6 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003557 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011160 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011169 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034181 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g043980 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g078410 | HTA13 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g082134 | HTA6 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g14593 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04736 | HTA6 | histone *(H2A) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g11673 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01994 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09905 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09993 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g54113 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45042.t1 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g07967 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G127000.1 | HTA7, Ceric.01G127000 | histone *(H2A) & original description: pacid=50592416... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G127100.1 | HTA6, Ceric.01G127100 | histone *(H2A) & original description: pacid=50591885... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G046500.1 | HTA7, Ceric.06G046500 | histone *(H2A) & original description: pacid=50619602... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G083100.1 | HTA7, Ceric.11G083100 | histone *(H2A) & original description: pacid=50596723... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z006200.1 | HTA7, Ceric.1Z006200 | histone *(H2A) & original description: pacid=50569283... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G059300.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50594046... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G036600.1 | HTA7, Ceric.37G036600 | histone *(H2A) & original description: pacid=50616072... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g264750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g264950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g265350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g266700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g268050 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g268300 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g271350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g273900 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g274200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g274800 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g275850 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g276500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g276950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g504500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g504750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g505550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g506250 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g570100 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g590800 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre13.g591150 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g708550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g709200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g710400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g711700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g713400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g714500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13937 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05168 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011034001 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031123001 | HTA7 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Gb_06384 | HTA6 | histone (H2A) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_07070 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25326 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25942 | No alias | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39944 | GAMMA-H2AX,... | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g31800.1 | HTA12, LOC_Os01g31800 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17100.1 | HTA12, LOC_Os03g17100 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g02300.1 | HTA12, LOC_Os05g02300 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g36140.1 | RAT5, HTA1,... | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33100.1 | HTA2, LOC_Os08g33100 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g37716 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g39719 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g39892 | HTA10 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_169054g0020 | HTA10 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| MA_213048g0010 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| MA_427046g0010 | RAT5, HTA1, ATHTA1 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| MA_74667g0010 | HTA7 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| MA_962778g0010 | HTA7 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g00760.1 | GAMMA-H2AX,... | histone (H2A) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g11191 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29485 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00069 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11307 | HTA10 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c5_1791V3.1 | HTA10, Pp3c5_1791 | histone H2A 10 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c5_1800V3.1 | HTA10, Pp3c5_1800 | histone H2A 10 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c6_29410V3.1 | HTA10, Pp3c6_29410 | histone H2A 10 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g03457 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g000823 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=1-471 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29426 | No alias | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo166626 | RAT5, HTA1, ATHTA1 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Smo170948 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Smo73637 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Smo76653 | HTA2 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099410.3.1 | HTA7, Solyc01g099410 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g084430.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g010400.3.1 | HTA12, Solyc09g010400 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g074300.1.1 | GAMMA-H2AX,... | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g006560.4.1 | HTA10, Solyc10g006560 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g073250.2.1 | HTA12, Solyc11g073250 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g073260.2.1 | HTA12, Solyc11g073260 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g005270.2.1 | HTA10, Solyc12g005270 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03104 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g03105 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03210 | HTA6 | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g03522 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g03889 | HTA7 | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g32347 | HTA6 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32923 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g45415 | HTA6 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g48382 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11136 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12865 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14389 | HTA7 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g42031 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011643_P001 | HTA6, Zm00001e011643 | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e020483_P001 | HTA6, Zm00001e020483 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033014_P001 | HTA6, Zm00001e033014 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034815_P001 | HTA12, Zm00001e034815 | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e039735_P001 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |